PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma239g00140.1
Common NameZOSMA_239G00140
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bHLH
Protein Properties Length: 193aa    MW: 22146.3 Da    PI: 4.3155
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma239g00140.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH261.7e-08150177430
                       HHHHHHHHHHHHHHHHHHHHHCTSCC.C CS
               HLH   4 ahnerErrRRdriNsafeeLrellPk.a 30 
                       a n +Er+RR++iN+++  L +l+P  a
  Zosma239g00140.1 150 ARNFNERKRRRDINNKIKALHDLIPAvA 177
                       7899*********************855 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.41E-7144180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.7E-8145183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.661146192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.84E-5149178No hitNo description
PfamPF000105.7E-6150177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MNFNGEEWWN NQVQESDEWK ELSAWISKEI IEKQDVDDMG RFPGVVLPDV AEMENKATHV  60
ATNFSTLPPL LFQINPSEIQ EGFLQDYQVT DVTPPLITNT NYHAFDDDDD DDDDNDNDDD  120
EGKIGANDKK RIRLTDNQDV MPSSSRQASA RNFNERKRRR DINNKIKALH DLIPAVAKRL  180
VKSVCWTKYT TT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1155159RKRRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9PHF21e-141A0A0K9PHF2_Z